hello, 
  
I try to generate a mesh for use in OpenFoam  by gmshToFoam conversion, but I 
alwas get the warning:
 
--> FOAM Warning :
    From function polyMesh::polyMesh(... construct from shapes...)
    in file meshes/polyMesh/polyMeshFromShapeMesh.C at line 576
    Found 28864 undefined faces in mesh; adding to default patch.
Finding faces of patch 0
Finding faces of patch 1
Finding faces of patch 2
--> FOAM Warning : Not using gmsh face 4(1446 14016 14017 1447) since zero 
vertex is not on boundary of polyMesh
.........
 
However i got polymesh directory with all files. but the faces or boundaries 
are not reading. 
patches in boundary files are even taking nFace=0 even if startface#0 in some 
patches. 
it seems to be arbitrary because i change many times the order and the way to 
define the physical surface and the result is different  all the time.

here attached my script. and checkMesh outline.  
 

Any idea what I am doing wrong? Thanks
 
 
Ouafa
 
/*---------------------------------------------------------------------------*\
| =========                 |                                                 |
| \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox           |
|  \\    /   O peration     | Version:  1.5                                   |
|   \\  /    A nd           | Web:      http://www.OpenFOAM.org               |
|    \\/     M anipulation  |                                                 |
\*---------------------------------------------------------------------------*/
Exec   : checkMesh
Date   : Jul 09 2009
Time   : 15:36:04
Host   : lambda31
PID    : 13084
Case   : /home/flurec/commun/ouafa/tmpgmsh
nProcs : 1
// * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
Create time
Create polyMesh for time = constant
Time = constant
Mesh stats
    points:           135894
    faces:            378092
    internal faces:   349228
    cells:            121220
    boundary patches: 6
    point zones:      0
    face zones:       2
    cell zones:       26
Number of cells of each type: 
    hexahedra:     121220
    prisms:        0
    wedges:        0
    pyramids:      0
    tet wedges:    0
    tetrahedra:    0
    polyhedra:     0
Checking topology...
    Boundary definition OK.
    Point usage OK.
    Upper triangular ordering OK.
    Topological cell zip-up check OK.
    Face vertices OK.
    Face-face connectivity OK.
    Number of regions: 1 (OK).
Checking patch topology for multiply connected surfaces ...
    Patch               Faces    Points    Surface
    jonction            2565     2604      ok (not multiply connected)
    interface           5111     5302      ok (not multiply connected)
    inlet                      0          0             ok (empty)
    outlet                    0          0             ok (empty)
    wall                12122    12354     ok (not multiply connected)
    defaultFaces        9066     9450    ok (not multiply connected)
Checking geometry...
    Domain bounding box: (-100 0 -50) (150 50 50)
    Boundary openness (-7.18902e-18 3.05372e-15 9.36245e-17) OK.
    Max cell openness = 2.67949e-16 OK.
    Max aspect ratio = 26.7476 OK.
    Minumum face area = 0.312226. Maximum face area = 9.50492.  Face area 
magnitudes OK.
    Min volume = 1.56113. Max volume = 15.7656.  Total volume = 1.25e+06.  Cell 
volumes OK.
    Mesh non-orthogonality Max: 41.0303 average: 5.01782
    Non-orthogonality check OK.
    Face pyramids OK.
    Max skewness = 0.468149 OK.
    All angles in faces OK.
    Face flatness (1 = flat, 0 = butterfly) : average = 1  min = 1
    All face flatness OK.
Mesh OK.
End
 

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///////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////
//
//         Génération de la géométrie Jonction AREVA GMSH
//
///////////////////////////////////////////////////////////////////////////////////////////////////////////////////////////

//Data
lc  = 5.;      

N1  = 20;    
N2  = N1;      
N3  = 2*N1;    

arctheta1 = 11;  
arctheta2 = 20;   

f   = 1.1;     

h1  = 50;   
Nz1 = 30;    

d1=7.0711; 
d2=14.1421; 
d3=16.2635; 
d4=50; 

//---------------------------------------------------------------------------
Point(1)={0, 0, 0, lc};
Point(2)={-d1, 0, d1, lc};
Point(3)={d1, 0, d1, lc};
Point(4)={d1, 0, -d1, lc};
Point(5)={-d1, 0, -d1, lc};
Point(6)={-d2, 0, d2, lc};
Point(7)={d2, 0, d2, lc};
Point(8)={d2, 0, -d2, lc};
Point(9)={-d2, 0, -d2, lc};
Point(10)={-d3, 0, d3, lc};
Point(11)={d3, 0, d3, lc};
Point(12)={d3, 0, -d3, lc};
Point(13)={-d3, 0, -d3, lc};
Point(14)={-d4, 0, d4, lc};
Point(15)={-d3, 0, d4, lc};
Point(16)={d3, 0, d4, lc};
Point(17)={d4, 0, d4, lc};
Point(18)={d4, 0, d3, lc};
Point(19)={d4, 0, -d3, lc};
Point(20)={d4, 0, -d4, lc};
Point(21)={d3, 0, -d4, lc};
Point(22)={-d3, 0, -d4, lc};
Point(23)={-d4, 0, -d4, lc};
Point(24)={-d4, 0, -d3, lc};
Point(25)={-d4, 0, d3, lc};
Point(26)={100, 0, d4, lc};
Point(27)={100, 0, d3, lc};
Point(28)={100, 0, -d3, lc};
Point(29)={100, 0, -d4, lc};
Point(30)={-100, 0, d4, lc};
Point(31)={-100, 0, d3, lc};
Point(32)={-100, 0, -d3, lc};
Point(33)={-100, 0, -d4, lc};
Point(34)={150, 0, d4, lc};
Point(35)={150, 0, d3, lc};
Point(36)={150, 0, -d3, lc};
Point(37)={150, 0, -d4, lc};

//---------------------------------------------------------------------------
Line(1) = {2,3}; 
Line(2) = {3,4}; 
Line(3) = {4,5}; 
Line(4) = {5,2}; 
Circle(5) = {6,1,7};
Circle(6) = {7,1,8};
Circle(7) = {8,1,9};
Circle(8) = {9,1,6};
Line(9 ) = {14,15}; 
Line(10) = {15,16}; 
Line(11) = {16,17}; 
Line(12) = {17,18}; 
Line(13) = {18,19}; 
Line(14) = {19,20}; 
Line(15) = {20,21}; 
Line(16) = {21,22}; 
Line(17) = {22,23}; 
Line(18) = {23,24}; 
Line(19) = {24,25}; 
Line(20) = {25,14}; 
Line(32) = {21,12}; 
Line(33) = {24,13}; 
Line(34) = {13,22}; 
Line(35) = {15,10}; 
Line(36) = {10,25}; 
Line(37) = {18,11}; 
Line(38) = {11,16}; 
Line(21) = {17,26}; 
Line(22) = {26,27}; 
Line(23) = {27,28}; 
Line(24) = {28,29}; 
Line(25) = {29,20}; 
Line(41) = {27,18}; 
Line(42) = {28,19};
Line(31) = {12,19}; 
Line(26) = {23,33}; 
Line(27) = {33,32}; 
Line(28) = {32,31}; 
Line(29) = {31,30}; 
Line(30) = {30,14}; 
Line(39) = {25,31}; 
Line(40) = {24,32}; 
Line(43) = {26,34}; 
Line(44) = {27,35}; 
Line(45) = {28,36}; 
Line(46) = {29,37};
Line(47) = {34,35}; 
Line(48) = {35,36}; 
Line(49) = {36,37}; 
Line(50) = {2,6};
Line(51) = {3,7}; 
Line(52) = {4,8}; 
Line(53) = {5,9}; 
Line(54) = {6,10};
Line(55) = {7,11}; 
Line(56) = {8,12}; 
Line(57) = {9,13}; 
Circle(58) = {10,1,11};
Circle(59) = {10,1,13};
Circle(60) = {13,1,12};
Circle(61) = {12,1,11};


//---------------------------------------------------------------------------
Line Loop(1) = {2,3,4,1}; 
Line Loop(2) = {-51,-1,50,5}; 
Line Loop(3) = {6,-52,-2,51}; 
Line Loop(4) = {52,7,-53,-3}; 
Line Loop(5) = {53,8,-50,-4}; 
Line Loop(6) = {-55,-5,54,58}; 
Line Loop(7) = {-61,-56,-6,55}; 
Line Loop(8) = {56,-60,-57,-7}; 
Line Loop(9) = {-8,57,-59,-54}; 
Line Loop(10) = {13,-31,61,-37}; 
Line Loop(11) = {-32,16,-34,60}; 
Line Loop(12) = {59,-33,19,-36}; 
Line Loop(13) = {-38,-58,-35,10}; 
Line Loop(14) = {12,37,38,11}; 
Line Loop(15) = {14,15,32,31}; 
Line Loop(16) = {34,17,18,33}; 
Line Loop(17) = {35,36,20,9}; 
Line Loop(18) = {22,41,-12,21}; 
Line Loop(19) = {23,42,-13,-41}; 
Line Loop(20) = {24,25,-14,-42}; 
Line Loop(21) = {-20,39,29,30}; 
Line Loop(22) = {-19,40,28,-39}; 
Line Loop(23) = {-18,26,27,-40}; 
Line Loop(24) = {47,-44,-22,43}; 
Line Loop(25) = {48,-45,-23,44}; 
Line Loop(26) = {49,-46,-24,45}; 

//---------------------------------------------------------------------------
s1  = newreg; Plane Surface(s1) = {1}; 
s2  = newreg; Plane Surface(s2) = {2}; 
s3  = newreg; Plane Surface(s3) = {3}; 
s4  = newreg; Plane Surface(s4) = {4}; 
s5  = newreg; Plane Surface(s5) = {5}; 
s6  = newreg; Plane Surface(s6) = {6}; 
s7  = newreg; Plane Surface(s7) = {7}; 
s8  = newreg; Plane Surface(s8) = {8}; 
s9  = newreg; Plane Surface(s9) = {9}; 
s10 = newreg; Plane Surface(s10) = {10}; 
s11 = newreg; Plane Surface(s11) = {11}; 
s12 = newreg; Plane Surface(s12) = {12}; 
s13 = newreg; Plane Surface(s13) = {13}; 
s14 = newreg; Plane Surface(s14) = {14}; 
s15 = newreg; Plane Surface(s15) = {15}; 
s16 = newreg; Plane Surface(s16) = {16}; 
s17 = newreg; Plane Surface(s17) = {17}; 
s18 = newreg; Plane Surface(s18) = {18}; 
s19 = newreg; Plane Surface(s19) = {19}; 
s20 = newreg; Plane Surface(s20) = {20}; 
s21 = newreg; Plane Surface(s21) = {21}; 
s22 = newreg; Plane Surface(s22) = {22}; 
s23 = newreg; Plane Surface(s23) = {23}; 
s24 = newreg; Plane Surface(s24) = {24}; 
s25 = newreg; Plane Surface(s25) = {25}; 
s26 = newreg; Plane Surface(s26) = {26}; 


//---------------------------------------------------------------------------
Transfinite Line{54,55,56,57}=arctheta1 Using Progression f;
Transfinite Line{50,51,52,53}=arctheta2 Using Progression 1/f; 

Transfinite Line {11,37,31,15,9,36,33,17} = N1 Using Progression 1.0;
Transfinite Line 
{20,19,18,35,59,34,38,61,32,12,13,14,58,10,16,5,7,60,61,6,8,1,2,3,4} = N1 Using 
Progression 1.0;
Transfinite Line {20,35,38,12} = N1 Using Progression 1.0;
Transfinite Line {19,13} = N1 Using Progression 1.0;
Transfinite Line {18,34,32,14} = N1 Using Progression 1.0;
Transfinite Line {21,41,42,25,30,39,40,26} = N3 Using Progression 1.0;
Transfinite Line {22,12,20,23,13,19,24,14,18} = N1 Using Progression 1.0;
Transfinite Line {43,44,45,46,30,39,40,26} = N3 Using Progression 1.0;
Transfinite Line {47,48,49,22,23,24,20,19,18,29,28,27} = N1 Using Progression 
1.0;

Transfinite Surface {s1} = {2,3,4,5};
Transfinite Surface {s2} = {2,6,7,3};
Transfinite Surface {s3} = {3,7,8,4};
Transfinite Surface {s4} = {4,8,9,5};
Transfinite Surface {s5} = {5,9,6,2};
Transfinite Surface {s6} = {11,7,6,10};
Transfinite Surface {s7} = {11,7,8,12};
Transfinite Surface {s8} = {8,12,13,9};
Transfinite Surface {s9} = {9,13,10,6};
Transfinite Surface {s10} = {11,18,19,12};
Transfinite Surface {s11} = {12,21,22,13};
Transfinite Surface {s12} = {13,24,25,10};
Transfinite Surface {s13} = {11,10,15,16};
Transfinite Surface {s14} = {18,11,16,17};
Transfinite Surface {s15} = {12,19,20,21};
Transfinite Surface {s16} = {13,22,23,24};
Transfinite Surface {s17} = {10,25,14,15};
Transfinite Surface {s18} = {17,26,27,18};
Transfinite Surface {s19} = {18,27,28,19};
Transfinite Surface {s20} = {19,28,29,20};
Transfinite Surface {s21} = {14,25,31,30};
Transfinite Surface {s22} = {25,24,32,31};
Transfinite Surface {s23} = {23,24,32,33};
Transfinite Surface {s24} = {34,26,27,35};
Transfinite Surface {s25} = {36,35,27,28};
Transfinite Surface {s26} = {37,36,28,29};

Recombine Surface {s1:s26};

//---------------------------------------------------------------------------
i  = 1;
For s In {s1:s26}  
out1[] = Extrude {0,h1,0} { 
  Surface { s }; Layers{10};   Recombine; 
};
ns[i] = out1[0];
fg[i] = out1[2];
fb[i] = out1[3];
fd[i] = out1[4];
fh[i] = out1[5];

nv[i] = newreg;
Physical Volume (nv[i]) = {out1[1]};
i += 1;
EndFor


//---------------------------------------------------------------------------
Physical Surface("inlet") = {fg[1]};            
Physical Surface("outlet") = {fd[1]};   

Physical Surface("interface") = {s10:s20};                                      
                          
Physical Surface("jonction") = {s1:s9};  

Physical Surface("wall") = {ns[1],ns[2],ns[3],ns[4],ns[5],ns[6],ns[7],ns[8],
                            
ns[9],ns[10],ns[11],ns[12],ns[13],ns[14],ns[15],ns[16],
                            
ns[17],ns[18],ns[19],ns[20],ns[21],ns[22],ns[23],ns[24],ns[25],ns[26]};    




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