Hi, David,

Now I've got 12 clusters from my traj.trr and cluster members as well by 
g_cluster,
should I calculate the size of clusters by each #st/total #st, ie, for cluster 
12 38765/(1+8+21+141+...+38765)?

The g_clustsize "computes the size distributions of molecular/atomic clusters in
the gas phase. The output is given in the form of a XPM file. The total
number of clusters is written to a XVG file."(taken from help file).Is it not 
suitable to use g_clustsize command for my peptide in water solution ?

Thanks.

_______________________________________________
gmx-users mailing list    [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please don't post (un)subscribe requests to the list. Use the 
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php

Reply via email to