On Wed, 26 Apr 2006 02:27:45 -0500 Akshay Patny <[EMAIL PROTECTED]> wrote:
> Hi > > > > I am trying to install Gromacs-3.3.1 The machine is SGI Altix and the output > of the uname -a for machine is: > > > > Linux redwood 2.6.5-7.244-sn2 #1 SMP Mon Dec 12 18:32:25 UTC 2005 ia64 ia64 > ia64 GNU/Linux > > > > I do not have root privileges and I am trying to install it in the local > directory I have permissions for which is: > > > > I unpacked gromacs-3.3.1.tar in the /work1/r0914 > > > > It made a directory /work1/r0914/gromacs-3.3.1/ > > > > I first installed fftw-3.1.1 (both single precision and double precision > using) in a separate directory which is: > > > > ums/ro914/fftw-3.1.1 > > > > Then, I cd to /work1/r0914/gromacs-3.3.1/ > > > > # setenv CPPFLAGS -I/ ums/ro914/fftw-3.1.1/include > > # setenv LDFLAGS -L/ ums/ro914/fftw-3.1.1/lib > > > > # ./configure -prefix=/work1/r0914/gromacs-3.3.1/ -prefix tells install to which directory it should copy the program and all of its files. I think it is not a good idea to install the program directly into the source tree. use something else as destination directory e.g /work1/r0914/prog. > > > > # make > > > > # make install > > > > I got the error in the make install which is: > > ____________________________________________________________________________ > ______________ > > > > /usr/bin/install: `./g_sham.1' and > `/work1/r0914/gromacs-3.3.1/man/man1/g_sham.1' are the same file > > /usr/bin/install -c -m 644 './make_edi.1' > '/work1/r0914/gromacs-3.3.1/man/man1/make_edi.1' > > /usr/bin/install: `./make_edi.1' and > `/work1/r0914/gromacs-3.3.1/man/man1/make_edi.1' are the same file > > make[3]: *** [install-man1] Error 1 > > make[3]: Leaving directory `/work1/r0914/gromacs-3.3.1/man/man1' > > make[2]: *** [install-am] Error 2 > > make[2]: Leaving directory `/work1/r0914/gromacs-3.3.1/man/man1' > > make[1]: *** [install-recursive] Error 1 > > make[1]: Leaving directory `/work1/r0914/gromacs-3.3.1/man' > > make: *** [install-recursive] Error 1 > > ____________________________________________________________________________ > ______________ > > > > Let me know if you need other details > > > > Regards > > Akshay > > > > Akshay Patny > > > > Graduate Research Assistant > Faser Hall 417, Department of Medicinal Chemistry > > Research Institute of Pharmaceutical Sciences > University of Mississippi > University, MS 38677 > E-mail: [EMAIL PROTECTED] > Tel: 662-915-1286 (office); Web: www.olemiss.edu > > > > -- René Meier Institut für Pharmazeutische Chemie Martin-Luther-Universität Halle email: [EMAIL PROTECTED] Wolfgang-Langenbeck-Str. 4 phone: (49)345 55-25043 06120 Halle (Saale) fax: (49)345 55-27355 Petition für ein Softwarepatent-Freies Europa: http://www.ffii.org/index.de.html _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
