Berk, you're right. That's the way it goes...
I think, Eric Sorin mentioned that on his page, though.
Regards
Maik Goette, Dipl. Biol.
Max Planck Institute for Biophysical Chemistry
Theoretical & computational biophysics department
Am Fassberg 11
37077 Goettingen
Germany
Tel. : ++49 551 201 2310
Fax : ++49 551 201 2302
Email : mgoette[at]mpi-bpc.mpg.de
mgoette2[at]gwdg.de
WWW : http://www.mpibpc.gwdg.de/groups/grubmueller/
Erik Lindahl wrote:
Hi Tom,
I'm not sure if it works, but if you are using gcc you could try
setting this in your mdp file:
cpp = "cpp -traditional-cpp"
Or, -no-traditional-cpp - I never remember which flag is which...
Cheers,
Erik
On Apr 28, 2006, at 3:53 PM, Tomas Kubar wrote:
hi
the file ffamber94bon.itp defines the parameters as macros. some of
the macro names contain an asterisk character (*), e.g.
#define proper_X_CT_N*_X 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000
this makes the preprocessor issue a warning (no whitespace after
macro name) because a macro name is not allowed to contain this
character. it looks like this might lead to wrong macro expansion in
case this dihedral is contained in the molecule's topology. right
now, I don't have an idea how to fix this...
tom
Adriana Pietropaolo wrote:
Dear gmx users,
I have some problems to use amber force field.
When I try to use grompp with a topology created with ffamber* (I
download each files from the gromacs home page) there are these errors:
missing terminating ' character
ffamber94bon.itp:384:116: missing terminating ' character
ffamber94bon.itp:385:116: missing terminating ' character
ffamber94bon.itp:391:116: missing terminating ' character
ffamber94bon.itp:423:23: warning: ISO C requires whitespace after
the macro nameffamber94bon.itp:425:23: warning: ISO C requires
whitespace after the macro nameffamber94bon.itp:426:23: warning: ISO
C requires whitespace after the macro nameffamber94bon.itp: 429:22:
warning: ISO C requires whitespace after the macro
nameffamber94bon.itp:438:20: warning: ISO C requires whitespace
after the macro namecpp exit code: 256
I found in the web some similar posts but I did not find any reply.
Would you suggest me some advice?
Thank you for your kind attention,
cheers,
Adriana
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