Ismael De Andrés Presa wrote:
Hi,
I want to obtain a benchmarking of GROMACS from 1 to 8 or more nodes
using the bootable cluster CD (BCCD) created by Dr. Paul Gray. In order to
benchmark GROMACS I have certain time resources. So, I have two options:
1º. Run GROMACS for 8 hours and how much simulated time it has generated.
2º. Generate a little simulation time with GROMACS having GROMACS and see
how much it cost with 1, 2, ...8 nodes.
For me the best option is the first one but I don´t know how I could do
that. Any idea would be appreciated. Thanks In Advance.
10 minutes is enough.
Isma.
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David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
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