Hi all,
We have a bunch of Opterons connected with Infiniband. I'm trying to
get Gromacs compiled for these nodes. I successfully built FFTW
3.1.2, but my Gromacs 3.3.1 config goes about halfway and then fails
with
checking size of int... configure: error: cannot compute sizeof
(int), 77
These are the flags I'm using:
./configure --with-fft=fftw3 --enable-float --prefix=/usr/local/src/
gromacs/gromacs-ib --enable-mpi
Any suggestions? Has anyone else successfully built/run Gromacs with
Pathscale/IB?
All help much appreciated,
Susan.
------------------------------------------------------------------------
----------
Susan Chacko
Computational Biologist, Helix Systems
Center for Information Technology
12B/2N207 Ph: 301-435-2982
National Institutes of Health Fax:
301-402-2190
Bethesda, MD 20814 Email:
[EMAIL PROTECTED]
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