I am trying to use g_wham to analyze an umbrella sampling run (I have already obtained the fixed version from Dr. Bostick) and am running into problems running the program, however I think these problems may be of my own doing (due to poorly selected parameters). The profile xvg file is giving me results of nan when using only one pull group, looking at the code and using gdb, this seems to be from values becoming zero and then propagating until I get a 0/0. This occurs at the beginning of the function calc_profile. Does anyone have any suggestions on the selection of proper parameters (number of bins, force constant, anything else). or know of any limitations of g_wham which may be causing my problem?

Thank you for any assistance you can provide

Robert Fiske


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