David Mobley wrote:
David,
I am not working in the same directory in which I previously compiled
3.3. And I'm just trying to run configure for the first time, so if I
"make distclean", I get an error "No rule to make target distclean".
The other possibility is I might be in the wrong branch or
something... I just followed the instructions on the web page:
cvs -z3 -d :pserver:[EMAIL PROTECTED]:/home/gmx/cvs login
cvs -z3 -d :pserver:[EMAIL PROTECTED]:/home/gmx/cvs co gmx
And then within the gmx directory:
cvs update -A -r release-3-1-patches
Should that give me the current CVS for 3.3.1? If so, any further
suggestions?
no you're checking out the head branch and applying all the 3.3.1
patches to it, which will be pretty messy.
you want to do
co -r release-3-3-patches gmx
Thanks,
David
On 8/29/06, David van der Spoel <[EMAIL PROTECTED]> wrote:
David Mobley wrote:
> All,
>
> I'm running into an error when running configure after bootstrap on
> the CVS version of GROMACS 3.3.1. I've previously compiled the release
> version of 3.3 with no problems. The error is this:
>
> configure: error: conditional "am__fastdepCXX" was never defined.
>
> This has previously been discussed on the list (below), but I'm a bit
> confused about how to troubleshoot. Looking at my Makefile.am, it is
> clearly older than my configure script, which is the problem this is
> attributed to below. What other problems might cause this?
>
> Thanks,
> David
>
have you tried
make distclean
does wonders usually
>
>> Hi,
>
>
>> On Apr 12, 2006, at 9:41 AM, Florian Haberl wrote:
>
>
>
>>>>
>>>> Does anyone have a clue from what this error is and how it can be
>>>> fixed?
>>>
>>>
>>> Update your gromacs version to 3.3.1
>>>
>>>> configure: error: conditional "am__fastdepCXX" was never defined
>>>
>>> Perhaps you have to update your system too, automake and or autoconf
>
>
>> That shouldn't be necessary - the automake/autoconf programs are only
>> used to create the configure script (if you are using the CVS
>> version, or if you edit some of the Makefile.am). Once a distribution
>> is created, "configure" is just a (very long) portable bourne shell
>> script.
>
>
>> However, configure checks to see if "automake/autoconf" has to be
>> rerun, and if the clock on your system and/or NFS is seriously off it
>> see a Makefile.am that is newer than the "configure" script. The
>> easiest solution in that case is to fix the clock and then unpack the
>> source again.
>
>
>> Erik
>
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--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
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_______________________________________________
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http://www.gromacs.org/mailman/listinfo/gmx-users
Please don't post (un)subscribe requests to the list. Use the www
interface or send it to [EMAIL PROTECTED]
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--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
_______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
