Title: Message
I submitted this as a bug a few days ago...
 
bug 107

Thanks,
Jonathan

____________________________
Jonathan Moore, Ph.D.
Research and Engineering Sciences - New Products
Core R&D
The Dow Chemical Company
1702 Building, Office 300E
Midland, MI 48674  USA
Phone:  (989) 636-9765
Fax: (989) 636-4019
E Mail: [EMAIL PROTECTED]

-----Original Message-----
From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Jon Ellis
Sent: Friday, September 29, 2006 10:29 AM
To: [email protected]
Subject: [gmx-users] g_traj -ng not working with option -ng

Hello GMXers

I am trying to extract coordinates for a number of different groups over a trajectory using g_traj. 

When I run g_traj with the -ng 16 option, I can only specify a single group. I've tried for fewer or more groups, with no success, and I've tested to see if it would ask for the next group when it was finished, but it didn't.

It works fine when I use -com, but I need the full coordinates, not just Centres of Mass. I could specify each single atom as a group, but that would further increase the number of groups, and the post-processing, so I'm wondering if there's a solution? 

I'm running v3.3, but I've tried it with 3.31 as well. 

Any hints?

Cheers
Jon Ellis  



----------------------------------------
Jon Ellis 
PhD Candidate, Thompson Group
Institute of Biomaterials and Biomedical Engineering/Dept of Chemistry
University of Toronto
Lash Miller 147
(416) 978-6568
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