----- Original Message -----
From: "Mark Abraham" <[EMAIL PROTECTED]>
To: "Discussion list for GROMACS users" <[email protected]>
Sent: Friday, September 29, 2006 1:28 AM
Subject: Re: [gmx-users] HBond frequency
liu xin wrote:
Hello GMX users:
Just a quick question: how can I get the frequency of each HBond?
From hbond.ndx we can get a list of hbonds, e.g. hbonds between protein
and drug, if I want to check the frequency of each hbond between the two
components respectively, how can I realize it?
man g_hbond and look for -xbm
Almost. -hbm is the flag you would want to use.
/Erik
Mark
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