Dear Guru of Gromacs, i've a new user of this programm, and i've got a problem 1. I've got a polymer consists of N monomers of iso-propyl-acrilamide 2. I use Hyperchem to made a sequence 3 Save it in pdb format in HyperChem 4 Use editconf -f to create .gro format 5 then i use pdb2gmx with this gro file to make topology file and i've got an error. of course, gromacs don't know about my residue
The question is, How to make gromacs know about my residue ( all pollymer chain) or 1 monomer, and to make pollymer chain with it. -- Dmitriy Golubovsky
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