Hi, I see the broken molecules in VMD, but as it can also be seen in the .xtc file with gmxdump, it is not a display problem.
After some further tests on two different platforms, it seems that the problem is related to the mpi-version of mdrun. I only get the problem when running on several processors. Anyway, I will post this to bugzilla. Regards, Perttu On Thu, 23 Nov 2006, kitty ji wrote: > How do you find it is broken? > > If you just found it from VMD, may be it is just caused by display problem. > > ************************************************* > Ji Qing > Institute of Chemistry, Chinese Academy of Sciences > Tel: 0086-10-62562894 £¬82618423 > ************************************************* _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
