Ken Rotondi wrote:
These problems are typically due to grompp not finding cpp (make sure it's in your path) or having opened the top file in some non-linux text editor. Open the top file in vi and see if you see '*M^*' where you would expect line breaks. If so your top file is polluted. To change from mac line breaks to unix use:

tr '\015' '\012' <bad.top> fixed.top

Where '\015' is the mac line break and '\012' is the unix. If it's a windows prob. you'll have to google for the windows line break code. I have had occasions where the above did not fix the solution, very frustrating. If nether of the above fix the problem just re-create your .mdp file in vi, this always fixes this problem.

On recent Linux platforms, you can use dos2unix and unix2dos to do those conversions in-place. No idea about Mac.

Mark
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