Hi, Everyone, I got Error when adding a unnatural amio acid in a protein. I have all the rtp and hdb file modified using information either from ffgmx.rtp ffgmx.hdb or thr rtp file form progdrg. There is no H1 in either rtp file or my new pdb file. When I try use pdb2gmx to generate top file, it always give the error message following; "Atom H1 not found in rtp database in residue ASO, it looks a bit like H". I know it refers to the Hydrogen of the peptide bond which has nothing wrong there.
Hope can get help from you with this, Thanks, __________________________________________________ Do You Yahoo!? Tired of spam? Yahoo! Mail has the best spam protection around http://mail.yahoo.com _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
