Abil Aliev wrote:
While using genion with -np 3, i get 2 lines of Replacing sol. xxx with
Na and it hangs up. With -np 1 it works fine and replaces 1 SOL with Na.
I thought it might be my system, so went to /tutor/speptide, but it was
the same behaviour. I am using gromacs 3.3.1. As I recall genion worked
fine under 3.2.
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there is a problem compiling gromacs using gcc 4.x that may cause this.
see a recent bugzilla entry about it.
--
David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
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