It does not. If you plot Rg over time you will see that there are huge fluctuations that
correspond to PBC crossings. g_rdf -com has the same problem. The problem is created during
the process of finding the geometrical center of the group.
/
I am not sure whether g_gyrate takes
/>/ into account Periodic boundary conditions while calculating radius of
/>/ gyration for such a system./
_______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php