Dear all,

How can I generate a ".gro" and a ".top" from a ".pdb" file of a synthetic polymer residue (548 atoms with a random distribution of monomers)? There is some tutorial to use gromacs with strutures like that, instead proteins?
Problem:
The PRODRG webserver can't convert my structure, because there is so many atoms.

Thank you all,

All the best,

Marcelo


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