[EMAIL PROTECTED] wrote:
Hello,

I have a rather basic query.
I want to know which atoms of the reference structure will be used for
fitting , in g_rmsf program.
In the program g_rms there are separate options for fitting and
calcualation of rmsd. I wonder if it is possible for the user to select a
set of atoms for fitting and calculate the rmsf over another range of
atoms or the whole protein, similar as in g_rms program.

Probably. In fact, I'd be amazed if the same functionality were not present in g_rmsf as in g_rms, not that I've used the former. Have you tried it out to see?

Mark
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