Hi, You could use PRODRG to build an initial topology and then use the FF definition in you gromacs distribution to edit to suit.
On the PRODRG website, there is a link to the top right had of the page if memory serves me correctly to a beta server that will generate topology files consistent with the 43a1 FF. Cheers Mitch On Thu, 2007-02-15 at 17:48 -0800, Arneh Babakhani wrote: > Hi , I'd like to build a topology of a Drug. I'm aware of the PRODRG > website. > > But if my understanding is correct, on this website, you can only build > using one forcefield (GROMOS87). > > How does one build a topology using a different force field (say for > instance, oplsaa)? Is there a simple way to do it, > > Thanks, > > Arneh > > > _______________________________________________ > gmx-users mailing list [email protected] > http://www.gromacs.org/mailman/listinfo/gmx-users > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
