I'm currently using AMBER03 for a DNA-protein complex. A little bit of struggle and extra examination of topologies and such was needed when setting up the system, but nothing too daunting.

/Erik

7 mar 2007 kl. 01.12 skrev mathieu coincon:

I searched the database in order to choose which ff I should use.
But I would like to have feadback from people used to such simulations.
Thanks by advance

-------
Mathieu Coincon
PhD Student
Universite de Montreal
(+1)514-343-6111 #5352
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_______________________________________________
Erik Marklund, PhD student
Laboratory of Molecular Biophysics,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,  75124 Uppsala, Sweden
phone:  +46 18 471 4537         fax: +46 18 511 755
[EMAIL PROTECTED]       http://xray.bmc.uu.se/molbiophys


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