Hi,

We'll see how the new list footer appears - I just added a link with to the archive search page :-)

Cheers,

Erik

On Mar 23, 2007, at 1:03 PM, Tsjerk Wassenaar wrote:


Read the archives on the gromacs user list. Search for "protein" "out
of box" or something, and you'll get plenty of hits, even some from
just a few days ago! Please do some homework before turning to a user
list.

Tsjerk

On 3/23/07, Александр Журавлев <[EMAIL PROTECTED]> wrote:


Hie! When I try to make energy minimization of protein-ligand system in water box, after beginning the protein immediately moves out of water box leaving a hollow in water and ligand in the hollow, after that minimization continues. How could it be explained?

Best regards!

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--
Tsjerk A. Wassenaar, Ph.D.
Junior UD (post-doc)
Biomolecular NMR, Bijvoet Center
Utrecht University
Padualaan 8
3584 CH Utrecht
The Netherlands
P: +31-30-2539931
F: +31-30-2537623
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