> Please can someone help me with g_sdf > I would like to calculate the sdfs of two different types of > lipid headgroups around another species in my system. > > Specifically I have 119 lipids of one type and 116 of the > other- do I need to normalise to account for this difference? > If so, any advice as to how I would go about this?
Simply make them part of the same index group that you use to generate the SDF to. Catch ya, Dr. Dallas Warren Lecturer Department of Pharmaceutical Biology and Pharmacology Victorian College of Pharmacy, Monash University 381 Royal Parade, Parkville VIC 3010 [EMAIL PROTECTED] +61 3 9903 9524 --------------------------------- When the only tool you own is a hammer, every problem begins to resemble a nail. _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
