Pymol
http://pldserver1.biochem.queensu.ca/~rlc/work/teaching/BCHM823/pymol/alignment/
It has a bit ease of use than g_confrm that it offers more richer
choices for selecting atoms to be matched. See what fits to your needs.
Regards,
Yang Ye
On 6/25/2007 1:10 AM, Alan wrote:
Hi!
It may be a bit GMX off-topic: I am looking for a command line
superimpose application that would be able to get all individual pdb
files in folder and generated new pdb versions of them 3D superimposed.
Something like what SuperPose
(http://wishart.biology.ualberta.ca/SuperPose/help.html) does, but
then locally in my computer.
Many thanks in advance.
Cheers,
Alan
--
Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate
Department of Biochemistry, University of Cambridge.
80 Tennis Court Road, Cambridge CB2 1GA, UK.
>>http://www.bio.cam.ac.uk/~awd28 <http://www.bio.cam.ac.uk/%7Eawd28><<
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