Dear Hwankyu, What output did trjorder give? Was the harddisk full? It's fairly unlikely that this is a bug in trjorder. You're not the first one to have used this program.
Tsjerk On 8/4/07, Hwankyu Lee <[EMAIL PROTECTED]> wrote: > Dear GMX-users, > > I'm using Gromacs 3.3.1, and trying to collect solvents within specific > distance from a part of peptide. > I typed "trjorder -f *.xtc -n *.ndx -s *.tpr -o -nshell -da 8 -na 12 -r > 2.5". I correctly typed reference molecule, and the result of -nshell > looks OK, but couldn't get the result of "-o" (.xtc). > I wonder if I missed something or there is a bug in trjorder. > Thanks for your help. > > best, > Hwankyu. > _______________________________________________ > gmx-users mailing list [email protected] > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > -- Tsjerk A. Wassenaar, Ph.D. Junior UD (post-doc) Biomolecular NMR, Bijvoet Center Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands P: +31-30-2539931 F: +31-30-2537623 _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
