Hi all, As you suggest David I used genconf command without -rot option. I minimized a single capped trp molecule and got the minimized molecule and used that molecule with genconf command in order to create a box. > > Then, I solvated capped trp molecule within the created box with genbox > command. I wanted the box to have a total of 200 capped trp molecules. In > this respect, I used -maxsol 200 option. However, the resultant system had > only 11 capped trp molecules. > >What may be the problem?
Thanks Oz. _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
