I want to simulate two proteins, so for that is there any process to give both
files as an input and then fix the initial distance between them on my own
choice or do I need to make one separate file having both proteins and then use
this file as an input to GROMACS.
Yang Ye <[EMAIL PROTECTED]> wrote: Please explain your purpose more clearly.
On 8/25/2007 9:47 PM, rohit gole wrote:
> Hi,
>
> Is there any way in GROAMCS to incorporate two PDB files separately
> and then do simulation instead of appending both files to create a
> single file?
>
> If yes, then how the distance can be manipulated between the two
> proteins from the files?
>
> TIA
>
> Rohit
> IIT kanpur
>
> ------------------------------------------------------------------------
> Why delete messages? Unlimited storage is just a click away.
>
>
> ------------------------------------------------------------------------
>
> _______________________________________________
> gmx-users mailing list [email protected]
> http://www.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to [EMAIL PROTECTED]
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
_______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
---------------------------------
Get the freedom to save as many mails as you wish. Click here to know how._______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
