-------- Original Message --------
Subject: Gromacs Segmentation Fault
Date: Mon, 27 Aug 2007 11:49:26 +0800
From: CHEN Hung-Ru <[EMAIL PROTECTED]>
To: <[EMAIL PROTECTED]>
Dear Sir:
There is a problem. When we increase the atom numbers to around
6,500,000, "segmentation fault" occured.
We executed "mdrun_d -s topol.tpr -o DPPC.trr -c minimized.gro -e
em.edr ". The size of the file "topol.tpr" is 1.6G.
And there are sufficient 16G RAM in our machine.
Do you have any suggestions? Thank you.
Best regards.
Graham CHEN
--
David van der Spoel, Ph.D.
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone: +46184714205. Fax: +4618511755.
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
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