Error: number of coordinates in coordinate file XXXX.pdb does not match topology (topol.top)
Yes, that's really the problem. Check their # of atoms in .pdb and .top files (count 3xSOL). You may have used editconf+genbox more than once. Just start it all over again. Please remember to search the archive at http://www.gromacs.org/search before posting. On 8/28/07, Lycourgos Chiniadis <[EMAIL PROTECTED]> wrote: > Dear Gromacs users, > > I tried the grompp and I got the following message: '' Error: number of > coordinates in coordinate file XXXX.pdb does not match topology > (topol.top)''. > Is there any explanation why is this happening? > > I would appreciate any help. I am new in using MD and Gromacs in particular. > > Thank you in advance, > > Best regards, > > Lykourgos Chiniadis > Agricultural University of Athens > Physics Department > _______________________________________________ > gmx-users mailing list [email protected] > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read > http://www.gromacs.org/mailing_lists/users.php > -- Diego Enry B. Gomes Laboratório de Modelagem e Dinamica Molecular Universidade Federal do Rio de Janeiro - Brasil. _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
