Hi, For ED analysis you don't need to run make_edi. Check g_covar and later g_anaeig.
Ran. Anirban Ghosh wrote: > Hi All, > I want to do ED analysis along first principle component in GROMACS. I > am trying to make the .edi file through make_edi command. But cannot > understand which option to pick among -linfix. -linacc, -radfix, > -radacc, -radcon. I also cannot understand how to specify the > option(string) for this in the make_edi command. Please tell me how > to execute this command. Any suggestion is welcome. > > Regards, > > > > *Anirban Ghosh* > *M.Tech Bioinformatics* > *University of Hyderabad* > *Hyderabad - 500 046* > *Andhra Pradesh* > *India* > > ------------------------------------------------------------------------ > Try the revolutionary next-gen Yahoo! Mail. Click here. > <http://in.rd.yahoo.com/tagline_mail_10/*http://mrd.mail.yahoo.com/dc/landing> > > ------------------------------------------------------------------------ > > _______________________________________________ > gmx-users mailing list [email protected] > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- ------------------------------------------------------ Ran Friedman Postdoctoral Fellow Computational Structural Biology Group (A. Caflisch) Department of Biochemistry University of Zurich Winterthurerstrasse 190 CH-8057 Zurich, Switzerland Tel. +41-44-6355593 Email: [EMAIL PROTECTED] Skype: ran.friedman ------------------------------------------------------
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