Hi Mohammad, Seems this is your problem:
http://www.penguin-soft.com/penguin/man/8/mdrun.html Not quite the mdrun you meant to be running. Make sure that the gromacs directory comes first in the path or link/copy it under a different name. Best, Tsjerk On 9/29/07, Mohammad Ahmadi <[EMAIL PROTECTED]> wrote: > > Hi all, > I installed the gromacs on my system. The pdb2gmx, editconf,grompp,.. are > ok,but when I try to do mdrun I have this error: > mdadm: /dev/md-v not identified in config file. > > Any ideas in this relation? > > Thanks > ________________________________ > Need a vacation? Get great deals to amazing places on Yahoo! Travel. > _______________________________________________ > gmx-users mailing list [email protected] > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read > http://www.gromacs.org/mailing_lists/users.php > -- Tsjerk A. Wassenaar, Ph.D. Junior UD (post-doc) Biomolecular NMR, Bijvoet Center Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands P: +31-30-2539931 F: +31-30-2537623 _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
