Hi, I got these grid cells when I used pressure coupling. Check ur box size fluctation. when i got there, my box was exploding, however the calculation didnt crash. check the trajactory to see if there is big box size changes.
Belquis > Dechang Li wrote: >> Dear all, >> >> During my simulation, in the md.log file there always appeared >> >> Grid: 19 x 14 x 14 cells >> Grid: 18 x 14 x 14 cells >> Grid: 19 x 14 x 14 cells >> Grid: 18 x 14 x 14 cells >> Grid: 19 x 14 x 14 cells >> Grid: 18 x 14 x 14 cells >> Grid: 19 x 14 x 14 cells >> >> What did it mean? > it is the grid used for neighborsearching. this is perfectly normal when > you have a fluctuating box due to pressure coupling >> >> Best regards, >> >> 2007-12-2 >> ¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡¡ >> >> ========================================= >> Dechang Li, PhD Candidate >> Department of Engineering Mechanics >> Tsinghua University >> Beijing 100084 >> PR China >> >> Tel: +86-10-62773779(O) >> Email: [EMAIL PROTECTED] >> =========================================¡¡¡¡¡¡¡¡¡¡ >> >> >> ------------------------------------------------------------------------ >> >> _______________________________________________ >> gmx-users mailing list [email protected] >> http://www.gromacs.org/mailman/listinfo/gmx-users >> Please search the archive at http://www.gromacs.org/search before >> posting! >> Please don't post (un)subscribe requests to the list. Use the >> www interface or send it to [EMAIL PROTECTED] >> Can't post? Read http://www.gromacs.org/mailing_lists/users.php > > > -- > David van der Spoel, Ph.D. > Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University. > Box 596, 75124 Uppsala, Sweden. Phone: +46184714205. Fax: +4618511755. > [EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se > _______________________________________________ > gmx-users mailing list [email protected] > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before > posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read http://www.gromacs.org/mailing_lists/users.php > > > _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
