Subhrangshu Supakar wrote:
Hi RAN,
Thanks for your advice.
Do I need any other software with gromacs 3.2 for running the ab initio MD ?
If yes what are they? Is there any help somewhere to set up the system?

Check out http://wiki.gromacs.org/index.php/QMMM, since GROMACS doesn't do ab initio MD natively. Also, get rid of GROMACS 3.2 in favour of a new one, unless you have old simulations with which you have a serious need to maintain consistency.

Mark
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