From what I can see in the source the second column is the averaged
area from the whole trajectory and the third column is the standard
deviation.
Correct me anyone if I'm wrong.
- Daniel
On Mar 5, 2008, at 13:54, [EMAIL PROTECTED] wrote:
Hello All,
This might sound a bit stupid question. But I have no idea about
it. So here I am asking it.
I am using g_sas to calculate the solvent accessible area. But I am
not able to understand the values the program is giving out. I am
using options -or and -oa to get it plotted per residue and atom.
It generates three columns data per residue-type and atom-type
output. First column for Residue# or atom#. I am confused what the
second and third columns corresponds to? If anyone can suggest me.
There are no legends provided in the xvgr file generated either.
Thanking you,
Regards,
Monika
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---
Daniel Larsson
Molecular Biophysics group
Department of Cell and Molecular Biology
Uppsala University
+46-18-471 4006 (phone)
+46-18-511 755 (fax)
http://xray.bmc.uu.se/~larsson
[EMAIL PROTECTED]
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