Hi, I am trying to analyse the number of hydrogen bonds between two sets of residues in four different structures. I have run g_hbond for the two sets on each structure and now I wish to work out the average and standard deviation of the number of hydrogen bonds between these two sets for each structure. I am using g_analyze for this, but it gives me out two sets of values: SS1 and SS2. What are each of these, as I thought the value I was looking for was a single value of the hydrogen bonds between my two sets of residues? Am I missing something obvious or should I be doing something different?
Many thanks in advance, Anna _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
