Subhrangshu Supakar wrote:
Hi All,
I want to check the interaction of my small molecule on the surface of a
lipid membrane for which I wish to use the pre-equillibrated structures
available with the gromacs web site.
1. Can any body suggest me how do I generate the initial structure with
the pre-quil. membrane and the small molecules put on top of it ?
With a molecule building program or with a text editor.
2. Is it possible to measure effect of UV radiation (any wavelength) on
the system where in the UV would be able to hit the lipid bilayer
passing through the small molecule layer?
No. What does UV normally do to chemical bonds? Are MD simulations
useful in bond-breaking situations?
Mark
_______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
