Subhrangshu Supakar wrote:
Dear All,
I have a few questions about installing gromacs in a parallel set up:
I am planning to use a parallel system consisting of 4 x3650 boxes
connected to each other with a gigabit switch and the same OS installed
in all the three. The MPI would be LAM/MPICH and the boxes will use
their own HDDs. GROMACS will be installed in all of them with the mpi
option.
Now, does GROMACS (mdrun) write the output files on NODE0 only?
No.
Do I
have to copy the run input files to all the boxes?
Each MPI process needs to run the same executable with the same input
file - both need to be on a file system visible to the processor.
It would be of great help to me if somebody can suggest a particular
type of cluster setup procedure (if any) suitable for running GROMACS .
Mark
_______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
