Hi Does the Gromacs only recognize the residues in the pdb file? If they are not the standard amino acids in the library, Gromacs can't read, right???
Or, how does the Gromacs simulate the organic molecule? The command pdb2gmx could not produce the top and the gro file. Instead, it shows that " File input/output error: " Thanks Lin _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
