Hi: I'm using g_sas *to analyse a DPPC simulation but it gave the next warning: WARNING: could not find a Van der Waals radius for 128 atoms 3840 out of 6400 atoms were classified as hydrophobic
I saw that the **Van der Waals radius for phophorous atoms doesn't appear in vdwraddi.dat. When I modified it and add the **Van der Waals radius* for this atom and then it works well. But, where were taken the *Van der Waals radius* for Gromacs? Somebody knows the phophorous radius for gromacs? In the literature appears some valors and there aren't the same for this programs, such as: Gromacs Other N 0.110 0.155 O 0.105 0.152 Thank you in advance, Maité
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