Special thanks to Vitaly, Mark and Justin for there comments. I've revisited the wiki site and read through chapter 5 of the manual. I'm currently going through the tutorial with a standard protein. I run into a problem when I use the command:
grompp -f em.mdp -c fws_b4em.pdb -p fws.top -o fws_em.tpr The error states that the em.mdp file doesn't exists, but none of the steps in the tutorial leading up to this command creates the em.mdp file. I was just wondering what step in the process is the .mdp file created or do I have to have that already created off to the side ready for the grompp command? Thanks again, -John Landers _______________________________________________ gmx-users mailing list gmx-users@gromacs.org http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
