You can use genconf to replicate the 128-lipid system any number of
times you wish. You can also generate replicates of a subset of these
lipids (say if you wanted to replicate only 100 of them) by identifying
which residues you want, using genconf, and equilibrating thoroughly.
A similar discussion came across the list about a week ago...(hint:
check the archives for stuff like this)
-Justin
minnale wrote:
Hi all,
I found 128 popc lipid molecules in prof Tieleman's website ,I
want to work on lipids with more than 128 popc lipid molecules, I knew
that with help of VMD generate popc lipid molecules how many number we
want. Can anyone suggest anyother website.
Thanks in advance.
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--
========================================
Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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