i want to ask you question about how can i deprotonate or use deprotonated
cysteine because I have protein with “cys” in active site, and I want to use
deprotonated“cys”. when i run “pdb2gmx “ no option appearing of choosing Cys
deprotonated state possibility
Subject: RE: [gmx-users] antechamber topologies to gromacs formatDate: Sun, 27
Jul 2008 18:33:46 +0800From: [EMAIL PROTECTED]: [EMAIL PROTECTED]; [EMAIL
PROTECTED]:
Dear Gayen,
Please refer to this page for more information
http://chemistry.csulb.edu/ffamber/tools.html
From: [EMAIL PROTECTED] on behalf of ANINDITA GAYENSent: Sun 7/27/2008 6:18
PMTo: [EMAIL PROTECTED]: [gmx-users] antechamber topologies to gromacs format
does anyone know how to conver amber topologies produced by antechamber to
gromacs format?Waiting for responseAnindita GayenSenior Research
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