Sung Hyun Park wrote:
Dear Gmx-users,
This may be a dumb question, but I am wondering about the number of
hydrogen bonds in the "water" tutorial. The system is 216 SPC/E water
molecules in a box, and the number of hydrogen bonds per time frame
fluctuates around ~350, which gives th number of hydrogen bonds per
water mlecule to be only ~1.6. Isn't this too low, compared with the
typical number ~3.5 for bulk water mlecule?
I think it is SPC, and you can multiply the number by 2 since all HB are
shared between two mols.
Thanks,
Sung
------------------------------------------------------------------------
_______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php
--
David van der Spoel, Ph.D., Professor of Biology
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone: +46184714205. Fax: +4618511755.
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
_______________________________________________
gmx-users mailing list [email protected]
http://www.gromacs.org/mailman/listinfo/gmx-users
Please search the archive at http://www.gromacs.org/search before posting!
Please don't post (un)subscribe requests to the list. Use the
www interface or send it to [EMAIL PROTECTED]
Can't post? Read http://www.gromacs.org/mailing_lists/users.php