> Hi users
>
> I am modeling the aggregation of an amphoteric molecule in aqueous media, and 
> to analyze the trajectories,
> I want to plot the number of monomers in the aggregates vs time and the kind 
> of groups because in some trajectories i have dimers and monomers, or dimers 
> and trimers and so on
>
> Is there any program in Gromacs to do this?
> thanks in advance
>
> ROGELIO HERNANDEZ
>

See trajectory analysis section. There are some ways to do what you want.


-- 
Vitaly V. Chaban
School of Chemistry
National University of Kharkiv
Svoboda sq., 4, Kharkiv 61077, Ukraine
email: [EMAIL PROTECTED]
skype: vvchaban
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