Morteza Khabiri wrote:
Dear
I want make hole in my system. Because of this I oblige to use MSMS programm
to calculate the surface of my protein. Before using MSMS we should change
pdb file format to xyzr file format. I should use pdb_to_xvzr to produce
xvzr file. Unfortunately I couldn't run pdb_to_xvzr. After running i
faced with the following error:
./pdb_to_xyzr: line 102: nawk: command not found
thats very nice of you if someone could help me how to active pdb_to_xyzr.
I use chmod but it did not work.
"nawk" is a Unix/Linux utility. It looks like the program requires this tool to
work, so you need to install it. If it is installed, you will need to add its
location to your $PATH.
-Justin
Thanks alot
Morteza
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--
========================================
Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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