Alberto Sergio Garay wrote:
Dear David
Thank you for your time and attention. Using your last advice I finally
could resolve the problem.
As you told me I generated the file xlateat.dat with zero in the first
line (on my working directory) and everything work properly.
I used:
pdb2gmx -f polymer.gro -p top -o polymer2.gro -ter
Thank you again.
You still need to check and double check that your topology is OK
though... Good luck.
--
David van der Spoel, Ph.D., Professor of Biology
Molec. Biophys. group, Dept. of Cell & Molec. Biol., Uppsala University.
Box 596, 75124 Uppsala, Sweden. Phone: +46184714205. Fax: +4618511755.
[EMAIL PROTECTED] [EMAIL PROTECTED] http://folding.bmc.uu.se
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