I made .itp files for both amp and fructose-6-phosphate using the Dundee PRODRG server (I found a tutorial). Some of the atom types were not designated correctly so I found an entry for ATP in the .rtp file and used that as a basis to correct the files. Some of the desginations for ATP weren't what I thought they should be but I followed them anyway. I was wondering if someone wouldn't mind just going through this (as a second pair of eyes) to ensure that I have reassigned atom types correctly.
Thank you.
Mona Rahman
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Mona N. Rahman, Ph.D.
Dept. of Biochemistry/Pharmacology & Toxicology
Botterell Hall, Rooms 623 and 634 (lab)
Queen's University, Kingston, ON, K7L 3N6
Phone: 613-533-2993, 613-533-6293 (lab)
E-mail: [EMAIL PROTECTED]
amp.itp
Description: Binary data
f6p.itp
Description: Binary data
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