Hi, Can't help you with VMD, but I do have a script to take care of this in Pymol.
Cheers, Tsjerk On 11/25/08, xianghong qi <[EMAIL PROTECTED]> wrote: > Dear all: > > I am trying to show the dodecahedron box only in vmd since my simulation box > is dodecahedron. If I include water, I can see the box is dodecahedron. But > I want to get rid off all of water, then my box will not appear there. How > can I keep the dodecahedron box boundaries and solute only? Looks like only > the rectangular box boundaries can be drawn in VMD. > Does anyone has some suggestions? Appreciate your great help. > Happy Thanksgiving. > -Xianghong Qi > > -- > Some people make the world more special just by being in it. > > _______________________________________________ > gmx-users mailing list [email protected] > http://www.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [EMAIL PROTECTED] > Can't post? Read > http://www.gromacs.org/mailing_lists/users.php > -- Tsjerk A. Wassenaar, Ph.D. Junior UD (post-doc) Biomolecular NMR, Bijvoet Center Utrecht University Padualaan 8 3584 CH Utrecht The Netherlands P: +31-30-2539931 F: +31-30-2537623 _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
