Arthur Roberts wrote:
Hi, all,
This is probably an obvious question. I did a simulation with an ff53a6
force field, which lacks protons on aliphatic side chains. I have pdb
coordinates for each time. Is there a way to add protons to the
aliphatic side chains. Your input is appreciated.
Check out the "protonate" tool.
-Justin
Sincerely,
Art Roberts
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--
========================================
Justin A. Lemkul
Graduate Research Assistant
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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