Dear Sir, i'm one of the new gmx user. i have a problem with gromacs input file. i'll be thanking if you help me.
i'm working on protein system. i have pdb and itp file. in itp file there are hydrogen atoms but in pdb file no. so when i define top file the number of atoms don't match to each other and i get a fattal error. my forcefield in top file is ''ffgmx forcefield''. i'll be appriciate if you help me. Regards, Farhadian.
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