Dear shirin u can get your output in .pdb format by using command trjconv or by editconf. type trjonv -h or editconf -h on your terminal for more help.
sanjay upadhyay Research Scholar protein dynamics lab Dept of chemistry IIT powai, Mumbai 400076 _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/mailing_lists/users.php

